Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947520.1_cds_XP_016489184.1_79735
CDS Infomation

[gene=LOC107809103] [db_xref=GeneID:107809103] [protein=3-ketoacyl-CoA synthase 20-like] [protein_id=XP_016489184.1] [location=join(16369..17139,18399..19184)] [gbkey=CDS]
Sequence

ATGGGAGATGAATCAAATGGAAAAGTTTCAATTGAGGCTCAAGAAAGAAGTAGTTATAAT
AACAAACTTCCTAATTTTCTCCTATCAGTTAAGCTCAAATATGTAAAACTTGGCTACCAT
TATTTGATTAGCCATGTTATGTATTTGTGTCTTGTTCCAATTTTAGGTGCTGTTTCTGTT
CATCTTTCTACACTTACTGTAGAAGAAGTTGTCCAATTATGGTACCAACTCAAATTCAAT
CTTGTCACAGTTCTTTTATGCTCAGCTCTTATGGTTTTCTTGGCTACACTTTATTTTATG
ACTAGGCCAAGAAAAGTGTACCTAGTCGATTTTTCGTGTTACAAACCTAAACCAGATTTT
ATGTGTCCTAAGGAATTATTTATGGAAAGATCAAAAGAAGCTGGAATTTTTATCGATGAA
AATTTGGCATTTCAGAAAAAAATATTGGAGAGGTCAGGTTTAGGTCAAAAGACATATTTT
CCAGAAGCACTTTTGAAAGTACCACCAAATCCTTGTATGGCTGAGGCAAGAAAAGAAGCT
GAAATGGTTATGTTTGGTGCAATTGATGAATTGTTAGAGAAAACTGGTGTTAAGGCTAAA
GATATTGGGATTCTTGTGGTGAATTGTAGTTTGTTTAATCCAACTCCATCACTTTCTGCT
ATGATTGTTAATCATTATAAGCTTAGAGGAAATATTATGAGTTATAATCTTGGTGGTATG
GGCTGTAGTGCTGGATTAATTTCAATTGACCTTGCCAAGCAGATGCTACAGGTACATCCC
AACTCTTATGCACTAGTAGTCAGTATGGAAAACATAACACTCAATTGGTACTTTGGCAAC
AACAGATCAATGCTTGTTTCAAATTGCATTTTCAGAATGGGTGGTGCTGCAATTTTACTA
TCAAATAAATCCTCAGATCGTCGTCGTTCAAAATATCAACTCATTCACACAGTACGTACA
CACAAAGGTGCAGATGACAAAAGCTATAGTTGTGTATTTCAAGAAGAAGATGACAACAAA
AAAATTGGTGTAGCATTGTCCAAAGACCTAATGGCTGTAGCAGGAGAGGCTTTAAAAACA
AACATCACAACTCTCGGGCCAATAGTCCTTCCTATGTCCGAACAACTACTATTTTTCATC
ACATTAGTCGCGAGAAAAGTTTTCAAGATGAAAATTAAACCGTATATACCAGATTTTAAG
TTGGCGTTCGAGCATTTCTGTATTCATGCAGGTGGAAGGGCGGTGTTGGACGAGTTAGAG
AAGAATCTTGAGTTAAGTCAATGGCATATGGAACCCTCAAGAATGACATTATATAGGTTT
GGAAATACTTCAAGTAGTTCATTGTGGTATGAATTGGCATATACTGAAGCTAAAGGAAGG
ATTAAGAAAGGAGATAGAACATGGCAAATTGCATTTGGATCAGGTTTTAAATGTAACAGT
GCAGTGTGGTGTGCACTTAGGACAATTAATCCTGCTAAGGAGAAGAATCCATGGATGGAT
GAGATTGATGAATTCCCAGTTCAAGTACCTAGAGTTGTAACAATCAATGATTCCTAA

Peptide Sequence

PEP ID

XP_016489184.1
PEP Infomation

PREDICTED: 3-ketoacyl-CoA synthase 20-like [Nicotiana tabacum]
Sequence

MGDESNGKVSIEAQERSSYNNKLPNFLLSVKLKYVKLGYHYLISHVMYLCLVPILGAVSV
HLSTLTVEEVVQLWYQLKFNLVTVLLCSALMVFLATLYFMTRPRKVYLVDFSCYKPKPDF
MCPKELFMERSKEAGIFIDENLAFQKKILERSGLGQKTYFPEALLKVPPNPCMAEARKEA
EMVMFGAIDELLEKTGVKAKDIGILVVNCSLFNPTPSLSAMIVNHYKLRGNIMSYNLGGM
GCSAGLISIDLAKQMLQVHPNSYALVVSMENITLNWYFGNNRSMLVSNCIFRMGGAAILL
SNKSSDRRRSKYQLIHTVRTHKGADDKSYSCVFQEEDDNKKIGVALSKDLMAVAGEALKT
NITTLGPIVLPMSEQLLFFITLVARKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELE
KNLELSQWHMEPSRMTLYRFGNTSSSSLWYELAYTEAKGRIKKGDRTWQIAFGSGFKCNS
AVWCALRTINPAKEKNPWMDEIDEFPVQVPRVVTINDS

Transcript Sequence

Gene sequence data has not been registered.